4.1.1.1. wc_lang.config package¶
4.1.1.1.1. Submodules¶
4.1.1.1.2. wc_lang.config.core module¶
Configuration
- Author
Jonathan Karr <jonrkarr@gmail.com>
- Author
Arthur Goldberg <Arthur.Goldberg@mssm.edu>
- Date
2019-01-06
- Copyright
2017-2019, Karr Lab
- License
MIT
-
wc_lang.config.core.get_config(extra=None)[source]¶ Get configuration
- Parameters
extra (
dict, optional) – additional configuration to override- Returns
- nested dictionary with the configuration settings loaded from the
configuration source(s).
- Return type
configobj.ConfigObj
-
wc_lang.config.core.get_debug_logs_config(extra=None)[source]¶ Get debug logs configuration
- Parameters
extra (
dict, optional) – additional configuration to override- Returns
nested dictionary with the configuration settings loaded from the configuration source(s).
- Return type
configobj.ConfigObj
-
wc_lang.config.core.validate_config(config)[source]¶ Validate configuration
Check that flux_min_bound >= 0 and flux_max_bound >= flux_min_bound
- Parameters
config (
configobj.ConfigObj) – nested dictionary with the configuration settings- Raises
ValueError – if minimum dFBA flux bound is negative or the maximum dFBA flux bound is less than the minimum dFBA flux bound