3.1.1.1.1.3. rand_wc_model_gen.analysis.sim package¶

3.1.1.1.1.3.1. Submodules¶

3.1.1.1.1.3.2. rand_wc_model_gen.analysis.sim.rna module¶

Analysis of RNA dynamics of simulations of random whole-cell models

Author: Jonathan Karr <karr@mssm.edu>
Date: 2018-06-14
Copyright: 2018, Karr Lab
License: MIT

class rand_wc_model_gen.analysis.sim.rna.RnaSimulationAnalysis(sim_results_path, model=None, knowledge_base=None, out_path=None, options=None)[source]¶

Bases: wc_analysis.core.SimulationAnalysis

Analysis of RNA dynamics of simulations of random whole-cell models

plot_individual_rna(i_sim=0)[source]¶: Plot the dynamics of each RNA molecule for a single simulation

plot_total_rna()[source]¶: Plot the dynamics of the total RNA count of each simulation

run()[source]¶: Run the analysis

3.1.1.1.1.3.3. Module contents¶