wc_cli documentation

Integrated user interface for whole-cell models and whole-cell modeling tools

The integrated user interface provides modelers the following capabilities:

• Display the available models and tools

• Display the available operations for each model and tool

• Run whole-cell models and whole-cell modeling tools

Contents

• 1. Installation
  • 1.1. Prerequisites
  • 1.2. Latest revision from GitHub
• 2. Tutorial
  • 2.1. Models
    • 2.1.1. List the available models
    • 2.1.2. Get the available operations for a model
    • 2.1.3. Run a model operation
  • 2.2. Tools
    • 2.2.1. List the available tools
    • 2.2.2. Get the operations for a tool
    • 2.2.3. Run an operation of a tool
  • 2.3. Help
    • 2.3.1. Get help
• 3. API documentation
  • 3.1. wc_cli package
    • 3.1.1. Subpackages
    • 3.1.2. Submodules
    • 3.1.3. wc_cli.__main__ module
    • 3.1.4. wc_cli._version module
    • 3.1.5. Module contents
• 4. About
  • 4.1. License
  • 4.2. Development team
  • 4.3. Acknowledgements
  • 4.4. Questions and comments